PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0006777.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 352aa MW: 39427.2 Da PI: 6.9775 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.4 | 1.1e-10 | 14 | 85 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.......................TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg.......................kgRtlkqcksrwqkyl 48 rg+WT++Ede+lv+++++ g+ +W+t +++ g + R++k+c++rw +yl Rmu_sc0006777.1_g000005.1 14 RGPWTPDEDEILVNYINKNKGHgSWRTLPHHAGlnffvctatrsiwvlvnvcpfhgLLRCGKSCRLRWTNYL 85 89*****************99999**********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 91 | 136 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++l+++++ +lG++ W++Ia+ ++ gRt++++k+ w+++l Rmu_sc0006777.1_g000005.1 91 RGPFTDEEEKLIIQLHGMLGNR-WAAIASQLP-GRTDNEIKNLWNTHL 136 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MGRTPCCDKK GLKRGPWTPD EDEILVNYIN KNKGHGSWRT LPHHAGLNFF VCTATRSIWV 60 LVNVCPFHGL LRCGKSCRLR WTNYLRPDIK RGPFTDEEEK LIIQLHGMLG NRWAAIASQL 120 PGRTDNEIKN LWNTHLRKRL IRMGVNPQNH EPFTSDGSTS KASASIATRH MAQWESARLE 180 AEARLSRESS NFSTPLLDKS DSDYFLRLWY SEVGQSFRKF PTAGKTPSDS PISEASSSGK 240 CGSISAVTTE IGHCLMGSST IAGNQDEDIE YKVFKSITGE DMVYRIYKSN TENVTRGSDS 300 SSSNKLDDSS ESAMDLLLDY PINNDMSFLE DDMNDYATST SAKLENAFIC PL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-106 | MYB family protein |