PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0006675.1_g000007.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 537aa MW: 59474.8 Da PI: 6.827

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0006675.1_g000007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.9	1.8e-09	205	251	2	50
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktek 50 fY++Y+ +GFs r++k k+ +++++r++vCskeg r+++++ +e+ Rmu_sc0006675.1_g000007.1 205 FYSFYSLAMGFSFRNQKLDKE--ADTVVRRQLVCSKEGIRKKKSRLEEQ 251 9*************99998..6779************99887443 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MAIDPDSRDV LTTLGGVNNI EFCQRLGAGR LAFSQWYLHK ASLWKQSLVA ADSLEAGSGF 60 GCVKSVAADQ LGVGAVVVEV EKIRRGTAIS TVDFNRQPSR HRSPVQRAQS PGSHLGDYSN 120 VNCKPNSVRR NRVIVMGLVP SMKELGMWIM ESSADVYVES DKVQSIEEEQ FESDTDDTNG 180 KPYEDLEAAD MIGMKFGSVN EVDLFYSFYS LAMGFSFRNQ KLDKEADTVV RRQLVCSKEG 240 IRKKKSRLEE QISASYLPTS RKGASKAPFM QSGGIGVDVE GKLCNMFWRD TVSMLDYNSF 300 GDVFILDSTY KTNIYGKPLA VFVGVNNHRA IILFGCALLV DEMEDTYNWV LTAFLDSMNG 360 KRPISVITDG YEAMRNAVNG GCGCYNRLGH NVRTFPLRKE VDVNCDAHNA TNHAANSNVA 420 KHERGGHSSV FASPGPIGSV GVRHSTSTFR SNRSAFAPTF QNDEDLAFLP PSRIQHMIHH 480 VEEARTFDFF SSHDNILSSV LGANGNLRME DQSISSNQPS ASHYTRGPNP FVHQWFY

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MAIDPDSRDV LTTLGGVNNI EFCQRLGAGR LAFSQWYLHK ASLWKQSLVA ADSLEAGSGF  60
GCVKSVAADQ LGVGAVVVEV EKIRRGTAIS TVDFNRQPSR HRSPVQRAQS PGSHLGDYSN  120
VNCKPNSVRR NRVIVMGLVP SMKELGMWIM ESSADVYVES DKVQSIEEEQ FESDTDDTNG  180
KPYEDLEAAD MIGMKFGSVN EVDLFYSFYS LAMGFSFRNQ KLDKEADTVV RRQLVCSKEG  240
IRKKKSRLEE QISASYLPTS RKGASKAPFM QSGGIGVDVE GKLCNMFWRD TVSMLDYNSF  300
GDVFILDSTY KTNIYGKPLA VFVGVNNHRA IILFGCALLV DEMEDTYNWV LTAFLDSMNG  360
KRPISVITDG YEAMRNAVNG GCGCYNRLGH NVRTFPLRKE VDVNCDAHNA TNHAANSNVA  420
KHERGGHSSV FASPGPIGSV GVRHSTSTFR SNRSAFAPTF QNDEDLAFLP PSRIQHMIHH  480
VEEARTFDFF SSHDNILSSV LGANGNLRME DQSISSNQPS ASHYTRGPNP FVHQWFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	1e-21	FAR1 family protein