PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0006646.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 378aa MW: 41415.7 Da PI: 8.4658

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0006646.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.6	9.6e-32	202	259	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+ Rmu_sc0006646.1_g000001.1 202 EDGYRWRKYGQKAVKNSPYPRSYYRCTNSKCTVKKRVERSSEDPTTVITTYEGQHCHH 259 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
FPFPPSKTTT RPFHVTKTLI TNYHLSRRRL PSSNSCSLRP PKSNPLYDVV RSTSASMDGD 60 KDTRDPGLTD FPTEPSWDSP YFFSNDRDTT VLSEFGWNFS PDDQIGADDR SDLAGSSTTT 120 TLAEQFPERS SNTNSDPAPV VGSVSSSSTE DPPERSTGSG SGGTPPPETP SSTTKVNKKK 180 GQKRIRQPRF AFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTNS KCTVKKRVER 240 SSEDPTTVIT TYEGQHCHHT VAFPRGGGGV NIISHDQSGF AAGSQLMQLP PVAQFMHYPT 300 SIQPRSQISP THNLTVGGSQ SHRLVRAGGT HYHHDQAAGG SQCIINPNHE PLPVVPVPTD 360 EGLLGDIVPP GMRNPFDG

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

FPFPPSKTTT RPFHVTKTLI TNYHLSRRRL PSSNSCSLRP PKSNPLYDVV RSTSASMDGD  60
KDTRDPGLTD FPTEPSWDSP YFFSNDRDTT VLSEFGWNFS PDDQIGADDR SDLAGSSTTT  120
TLAEQFPERS SNTNSDPAPV VGSVSSSSTE DPPERSTGSG SGGTPPPETP SSTTKVNKKK  180
GQKRIRQPRF AFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTNS KCTVKKRVER  240
SSEDPTTVIT TYEGQHCHHT VAFPRGGGGV NIISHDQSGF AAGSQLMQLP PVAQFMHYPT  300
SIQPRSQISP THNLTVGGSQ SHRLVRAGGT HYHHDQAAGG SQCIINPNHE PLPVVPVPTD  360
EGLLGDIVPP GMRNPFDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	3e-61	WRKY family protein