PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0006420.1_g000019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 177aa MW: 19585.8 Da PI: 4.8055 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 49.4 | 7.7e-16 | 48 | 104 | 4 | 54 |
-SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRak 54 R+t+t+ ql++L+ l++ ++yp+ e+++e+ +l ++++++V++WFqN +a+ Rmu_sc0006420.1_g000019.1 48 RWTPTPAQLRILQGLYYDkgHKYPTPEKIQEICLHLkpygQIEDKNVFFWFQNLKAR 104 9***************9557**********************************998 PP | |||||||
2 | Wus_type_Homeobox | 84.8 | 9.5e-28 | 46 | 105 | 3 | 61 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRe 61 + RWtPtp Q++iL+ ly+ +G + P+ e+iq+i +L+ yG+iedkNVf+WFQN kaR Rmu_sc0006420.1_g000019.1 46 NIRWTPTPAQLRILQGLYYdKGHKYPTPEKIQEICLHLKPYGQIEDKNVFFWFQNLKARG 105 67***************9889**************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS TQAAGSSANT PIRPTNIRWT PTPAQLRILQ 60 GLYYDKGHKY PTPEKIQEIC LHLKPYGQIE DKNVFFWFQN LKARGQSFME QRGGDHQEVE 120 TLPLFPVHGE DVLGNPKITS EEGSAFGYYS GGLGGYNSGS PVSFELSLNP SGAADLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 1e-18 | WOX family protein |