PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005446.1_g000015.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 696aa MW: 77865.2 Da PI: 7.2599

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005446.1_g000015.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.4	5.8e-19	457	518	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+ R+++t+eq++ Leel+++ ++p+a+++++ +++l +++ ++V++WFqN+Ra+e++ Rmu_sc0005446.1_g000015.1 457 RSCRWNPTPEQIKDLEELYRSgIKTPTAQQIRQVTARLrnygRVEGKNVFYWFQNHRARERQ 518 567***************99************************************97 PP
2	Wus_type_Homeobox	106.6	1.6e-34	458	520	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 + RW+PtpeQik Leely+sG++tP++++i+++ta+L++yG++e+kNVfyWFQN++aRerqk+ Rmu_sc0005446.1_g000015.1 458 SCRWNPTPEQIKDLEELYRSGIKTPTAQQIRQVTARLRNYGRVEGKNVFYWFQNHRARERQKR 520 67***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 696 aa Download sequence
MPSLALVLAN PSDAVTGVEH LAHDLGRAPP FRDLPTRSRV LTSPFCWSPN GYGSAMADLL 60 WLVRTATKRV AEGWSSGRMG RNSDGLVEVD SGVMDATSGG DAYLARFGGL HCLGAQIRCL 120 QMGVQIRRWL LLDVYRDLDL GSRRVMISIF YEEPRCNHTM STTIACLGEQ CGESRDESEV 180 DWSADFLHSQ IANSDCWETR PEIAHPATPR LRADTIIFVS PSPATPCPWI IHALNGNGES 240 TARSNDCYNS SVVFSGYSGH RFACMWYGNS SPRHALHVCI ISFSIRSSFD ECVSGFFLSP 300 LPFLAAGDFS GFLVFASPTV KLSGADVTHF QGWAELADGL AGQEKCQAFG FFLGFGQESQ 360 DFARSRSYRN GDCRDPNRNN NRDLPEYSIK AANPQPAVQP VLFTPKRSST SNMTQNPVLP 420 FNHHHHRMVP VMSDEQGRSS SGCFYSDKQP AAGAPRRSCR WNPTPEQIKD LEELYRSGIK 480 TPTAQQIRQV TARLRNYGRV EGKNVFYWFQ NHRARERQKR RRELISMHQS DTKQQQQTLI 540 NSNITSLQKK ESAGVSSVGR LEVEQQNRPT LPNFTVLSDQ ESSSVLQERM MSMVKSNSSR 600 LPVEQSDSPG PTSSDTNASS ATLICTKLLD FHHYYDYDYG MVLTAPNIYK EEEKDSKETQ 660 TLELFPLESD NLKSAKHTKL PMSRTSTADF KEDQYY

Sequence ? help Back to Top

Protein Sequence Length: 696 aa Download sequence

MPSLALVLAN PSDAVTGVEH LAHDLGRAPP FRDLPTRSRV LTSPFCWSPN GYGSAMADLL  60
WLVRTATKRV AEGWSSGRMG RNSDGLVEVD SGVMDATSGG DAYLARFGGL HCLGAQIRCL  120
QMGVQIRRWL LLDVYRDLDL GSRRVMISIF YEEPRCNHTM STTIACLGEQ CGESRDESEV  180
DWSADFLHSQ IANSDCWETR PEIAHPATPR LRADTIIFVS PSPATPCPWI IHALNGNGES  240
TARSNDCYNS SVVFSGYSGH RFACMWYGNS SPRHALHVCI ISFSIRSSFD ECVSGFFLSP  300
LPFLAAGDFS GFLVFASPTV KLSGADVTHF QGWAELADGL AGQEKCQAFG FFLGFGQESQ  360
DFARSRSYRN GDCRDPNRNN NRDLPEYSIK AANPQPAVQP VLFTPKRSST SNMTQNPVLP  420
FNHHHHRMVP VMSDEQGRSS SGCFYSDKQP AAGAPRRSCR WNPTPEQIKD LEELYRSGIK  480
TPTAQQIRQV TARLRNYGRV EGKNVFYWFQ NHRARERQKR RRELISMHQS DTKQQQQTLI  540
NSNITSLQKK ESAGVSSVGR LEVEQQNRPT LPNFTVLSDQ ESSSVLQERM MSMVKSNSSR  600
LPVEQSDSPG PTSSDTNASS ATLICTKLLD FHHYYDYDYG MVLTAPNIYK EEEKDSKETQ  660
TLELFPLESD NLKSAKHTKL PMSRTSTADF KEDQYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01500.1	2e-24	WOX family protein