PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004571.1_g000019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | HB-other | ||||||||
Protein Properties | Length: 198aa MW: 21214.1 Da PI: 4.6583 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 19.5 | 1.7e-06 | 30 | 59 | 2 | 31 |
T--SS--HHHHHHHHHHHHHSSS--HHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeere 31 ++R+t+t++q+++L+el++ + +++a+e++ Rmu_sc0004571.1_g000019.1 30 STRWTPTPDQIRILKELYYDKENLKAREKQ 59 58******************9999998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MEPQTQQLIE DGGSNQAAGS SANTPIRQSS TRWTPTPDQI RILKELYYDK ENLKAREKQM 60 KRLNRNVRVP MGTSSSSVGG SIDLNFGSTS STDDGGSIDL NFGSTSSTGA DGSIDLNFGS 120 WVGYRGQTFM EQQREDHQQI ETLPLFPMHG EDVLGNLKTT SKGGSGYGYY SGGSGSYNGG 180 SYVSFELSLN PSGAADLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 5e-08 | WOX family protein |