PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004399.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 411aa MW: 46106.4 Da PI: 6.6007

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004399.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.3	6e-19	71	160	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +Y+ YA+ +GF +r ++ ++ g+itkr++vC+kegkre + + +++ ++ ++etr++C a ++ +k ++++ +t++++ Rmu_sc0004399.1_g000009.1 71 WYRMYATALGFMTRLQRVTRG-IGGRITKRRLVCNKEGKREAKWLQkEDRVSNAKQETRCNCLAACCIHFNKnSQTYIITEFKT 153 7*************99997.9999***********9976624566778999*9999999888799***** PP FAR1 84 eHnHela 90 eHnH+la Rmu_sc0004399.1_g000009.1 154 EHNHDLA 160 **996 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MNFEHPSSSD CRYTEVQSAD QDSAEPQQKE KVSYGDENFT AKSHVGKSFA ELTAEDVEGR 60 EFATLDDAEN WYRMYATALG FMTRLQRVTR GIGGRITKRR LVCNKEGKRE AKWLQKEDRV 120 SNAKQETRCN CLAACCIHFN KNSQTYIITE FKTEHNHDLA MHSNGSVTNS DMGHLGARRT 180 CSVSTSRADD YTVKSNGGFE FVGDTEKDLF NNIEAEPRAK LFNQGEEAAS IVEVSDITMP 240 PWSINLVGFG DEYRCDHVDI PRGVTYSYVS LSPHVKAVSA NTASTLLRQI AGLTSIATEQ 300 SLKARDEILR LKRDSELALK TKEAEAAVLK RELAECRREL ELVKSADKYR YRTIEEVGGN 360 SKKQITEDNC NRGQSPEGGA DIQLLCSLGG WKSGFAPDKD MEFDSSKRKR R

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MNFEHPSSSD CRYTEVQSAD QDSAEPQQKE KVSYGDENFT AKSHVGKSFA ELTAEDVEGR  60
EFATLDDAEN WYRMYATALG FMTRLQRVTR GIGGRITKRR LVCNKEGKRE AKWLQKEDRV  120
SNAKQETRCN CLAACCIHFN KNSQTYIITE FKTEHNHDLA MHSNGSVTNS DMGHLGARRT  180
CSVSTSRADD YTVKSNGGFE FVGDTEKDLF NNIEAEPRAK LFNQGEEAAS IVEVSDITMP  240
PWSINLVGFG DEYRCDHVDI PRGVTYSYVS LSPHVKAVSA NTASTLLRQI AGLTSIATEQ  300
SLKARDEILR LKRDSELALK TKEAEAAVLK RELAECRREL ELVKSADKYR YRTIEEVGGN  360
SKKQITEDNC NRGQSPEGGA DIQLLCSLGG WKSGFAPDKD MEFDSSKRKR R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-11	FAR1 family protein