PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004085.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 174aa MW: 19557.1 Da PI: 9.9176 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.5 | 1.5e-15 | 27 | 89 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 rr+R+t+t++q+++L++lF++ r p+ e+ +++ +l +++ ++V++WF N+Ra+ek+ Rmu_sc0004085.1_g000003.1 27 RRSRWTPTTDQIRILKALFYNkgVRSPTVEQVQRIYLQLkwygKIEFKNVYFWFVNQRAREKQ 89 89******************7789*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 88.1 | 9e-29 | 28 | 91 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPt++Qi+iL++l++ +G+r+P+ e++qri +L+ yGkie kNV++WF N++aRe+qk+ Rmu_sc0004085.1_g000003.1 28 RSRWTPTTDQIRILKALFYnKGVRSPTVEQVQRIYLQLKWYGKIEFKNVYFWFVNQRAREKQKK 91 79**************98769*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MEPQTQQPTE DGGSNKSTGS SANMLCRRSR WTPTTDQIRI LKALFYNKGV RSPTVEQVQR 60 IYLQLKWYGK IEFKNVYFWF VNQRAREKQK KTSTSDVHVP MQRSELVGGS IMEQRGEDHQ 120 EIKTLALFPM HGEDIFGNMK TTSDGGGGHG GGSHISLELS LSCEGKAGKS FLSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 4e-25 | WOX family protein |