PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003720.1_g000023.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 160aa MW: 18237.7 Da PI: 7.7013 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 77.1 | 3.4e-24 | 26 | 111 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 Yn+YA + GFs+rk + ++ +g++ r+f+C keg+++++++ e++r ++ etrtgCka+++ dg w ++++++eH Rmu_sc0003720.1_g000023.1 26 LYNNYALRKGFSIRKGHIRRD-ASGNVRLREFMCAKEGFARDQDTF-EHKRYKKLETRTGCKAMIVFIVA-DGIWTISHINSEH 106 7****************9998.8888****************9999.999***************99999.************* PP FAR1 86 nHela 90 nH+la Rmu_sc0003720.1_g000023.1 107 NHDLA 111 ***97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MEEIAGEDGE LKPGMQVYSD DEAYNLYNNY ALRKGFSIRK GHIRRDASGN VRLREFMCAK 60 EGFARDQDTF EHKRYKKLET RTGCKAMIVF IVADGIWTIS HINSEHNHDL ARPEERQFLK 120 SGRKVLEAHG NVMLSMLGAG IPPTKSFFYL ANEMGGPEVH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 3e-17 | FAR1 family protein |