PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003465.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family VOZ
Protein Properties Length: 653aa    MW: 73319.7 Da    PI: 7.3648
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003465.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ358.33e-1104096193217
                        VOZ   3 psaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaata 86 
                                  +flgp calwdc+rpa+     +dyc +fhat al+eg+pg +pv+rp+gi+lkd++lf+al a  qgk vgip+cegaat 
  Rmu_sc0003465.1_g000003.1 409 EPSFLGPTCALWDCSRPAE---CGKDYCCNFHATSALEEGQPGKSPVFRPRGISLKDNALFDALIAWNQGKAVGIPNCEGAATL 489
                                567**************96...5689********************************************************** PP

                        VOZ  87 kspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhly 170
                                kspwn ++lf+ls+leget+rewlffdkprraf +gnr+qrslpd+sgrgwhesrkq+mkef+g+krsyymdpqps   +whl+
  Rmu_sc0003465.1_g000003.1 490 KSPWNDSKLFNLSFLEGETVREWLFFDKPRRAFGTGNRRQRSLPDHSGRGWHESRKQIMKEFDGQKRSYYMDPQPSIDQDWHLF 573
                                ************************************************************************************ PP

                        VOZ 171 eyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                                eye+n++da+alyrlelk    kks+kgkvs+  +adlqkk+g+lta
  Rmu_sc0003465.1_g000003.1 574 EYEVNNSDACALYRLELKFGIVKKSPKGKVSN-EVADLQKKMGKLTA 619
                                ******************************86.59**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 653 aa     Download sequence    
MILPAVKLGT LALKTFCKPI ANRLKKEAGL HPRFRQFIIN IAQANHRFTT NVQRRIYGHS  60
TDVAIRPLNE EKAVQAAAEL LGELFVFTVA GTALIFEVQR SSRSEARKEE LRKQELQAMK  120
QRDEELEREV QLLKKKLEEL EQLAKGRGIA GLFSFRHAQA TDNGNRNPSL TPEKILALPK  180
SRNPKNLQSE HSGQVTRHCF RSFEERGAMI KDSKGKCESS SHKLLKEKAK TRVDYLQAFL  240
TNLKSATKES RTDDNATLEE VNKMLQEWKA ELNEPSPASS LLADSLGSFS EELARLLRTD  300
EEDDATSPLK ELLPTKPESD LQNLHLGNLV QFTEDFYVSP EPQETFQEFY QCGDTASGFQ  360
NLMVDNSGFD HHFDFHQYVN EGPFIGGNDV KQPEDDAAPS VLPVISPTEP SFLGPTCALW  420
DCSRPAECGK DYCCNFHATS ALEEGQPGKS PVFRPRGISL KDNALFDALI AWNQGKAVGI  480
PNCEGAATLK SPWNDSKLFN LSFLEGETVR EWLFFDKPRR AFGTGNRRQR SLPDHSGRGW  540
HESRKQIMKE FDGQKRSYYM DPQPSIDQDW HLFEYEVNNS DACALYRLEL KFGIVKKSPK  600
GKVSNEVADL QKKMGKLTAE VATDGANNAK GKTKKKADAG NIFSSQSPMT STP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-127VOZ family protein