PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003383.1_g000026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 291aa MW: 32837.6 Da PI: 5.9865 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.5 | 4e-15 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed ll ++++ +G g+W++ a++ g++R +k+c++rw++yl Rmu_sc0003383.1_g000026.1 21 KGPWTLAEDTLLTNYIANHGEGHWNALAKCAGLKRKGKSCRLRWLNYL 68 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 45.3 | 2e-14 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia++++ gRt+ ++k +w++ Rmu_sc0003383.1_g000026.1 74 RGNLTSQEQLLILELHSKWGNR-WTKIAQHLP-GRTDDEIKTHWRT 117 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MAGVANIVCT SPNEEENELR KGPWTLAEDT LLTNYIANHG EGHWNALAKC AGLKRKGKSC 60 RLRWLNYLKP DTKRGNLTSQ EQLLILELHS KWGNRWTKIA QHLPGRTDDE IKTHWRTRVH 120 KQVRQLNIES NSERLLDAVR CFWMPTLHQK MEQPSSLSLD PSSSLSNSQI AVAPSLSPQT 180 YSVSSSPPSK VVSHVSDYSP IGNSSPSHSS LSSDSLISQL PQIQEQPASS SHAFEALNDN 240 YYVDYDMEGF RFDPVSEMAS FDTSQFDCQT AESNWIEDNY MTDTLWSMQG M |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 53 | 59 | LKRKGKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 4e-78 | MYB family protein |