PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003314.1_g000014.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 338aa    MW: 37353.3 Da    PI: 10.5538
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003314.1_g000014.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.5e-17270319255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                                ++ GVr+++ +g+W+AeIr+p     +  +r +lg+f+tae+Aa  +++a+  l+g
  Rmu_sc0003314.1_g000014.1 270 KFLGVRQRP-WGKWAAEIREP-----HsgRRLWLGTFDTAEDAAMVYDKAAVLLRG 319
                                688******.**********7.....337**********************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MFDNTGHNGS PVPVGLDSRK GDARHLVLEL PKSFRQAQKK RSKTLANRGQ DVTNKSKALD  60
WNAVSFGCDS PKDDARHVVL EASKSFLQAH EKHSKKLDNM GQDLTEKLKV KLKLKKGLHG  120
RPVPVRDDAL KGDAGNLVLE ASKSLEQSIG GLIDGGGNTE VDQHTQMETK SIKPRLVRIS  180
VTDGDATESS SDEEAEPLAT SHRVKKFINE IMIESSSTKT DSGVWRSRTT RMWRKKTGGK  240
SGLPATCRTL KAQTTWKKFR GVKAQATKNK FLGVRQRPWG KWAAEIREPH SGRRLWLGTF  300
DTAEDAAMVY DKAAVLLRGP DTFTNFSTPQ VANEDGNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53290.11e-30ERF family protein