PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003094.1_g000012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 195aa MW: 22064.6 Da PI: 4.6503 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.2 | 2.2e-14 | 68 | 127 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++ +g+Wv+e r+ps+ g k+ +r +lg+f+ta e a a+++ +k+++g Rmu_sc0003094.1_g000012.1 68 SSYRGVSQGI-WGKWVSESRVPSTntHGltlKKvARLWLGTFDTAVEVALAYDKTAKAMYG 127 67*****887.**********8884655998779************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MMPESSDVDR QMGKRPRVDD TLVKWEKYNE NSDFAKDGFV NRMPRKMPTT GARKGCMRGK 60 GGPENLNSSY RGVSQGIWGK WVSESRVPST NTHGLTLKKV ARLWLGTFDT AVEVALAYDK 120 TAKAMYGPVF PKSLETSISD ETTESVKDEL QMEDELVNND VEVEELAINN VRESVDEWHS 180 EPKYVKCESE TEDEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 1e-28 | ERF family protein |