PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003027.1_g000017.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB_related

Protein Properties

Length: 392aa MW: 43292.9 Da PI: 9.5831

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003027.1_g000017.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.1	1.7e-12	70	120	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT eE+e l +v+++G+g Wk I + R+ ++k++w++ Rmu_sc0003027.1_g000017.1 70 KQKWTSEEEEALRAGVRKHGTGKWKDIQKDPEfnpflSSRSNIDLKDKWRN 120 79*********************************9*********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MSTKLLEEPN KEKGASGSRS KSSSWDMADS ELQRKKKKFI NRSRAKPVAA VFDTEISNTE 60 PEPQKMGNPK QKWTSEEEEA LRAGVRKHGT GKWKDIQKDP EFNPFLSSRS NIDLKDKWRN 120 MSVSGVGGPR EKARMRPRDS PVTLFSTPQP SAAAPVKRDP AAALLKRESS AAPVKREAAA 180 SLVKGEPVAD DSPTEAKTEA KTAPMYNAMI FEALSNSTDP NGLETGAIAN FIEQRYVLEK 240 KNEVPQNFRR LLSSRLRRLV AQEKLEKFQN CFKIKSDSSG ETKAPLPPKQ NDAPLAPNAP 300 KQNDTPAAPK QNDVQLTQLQ SHADVIPYET VEEAAVAAAY KIAEAENKSF VAAEAVKESE 360 RVSQMFEDTN SVLQLAEEFL KKCSQGEVLL VV

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MSTKLLEEPN KEKGASGSRS KSSSWDMADS ELQRKKKKFI NRSRAKPVAA VFDTEISNTE  60
PEPQKMGNPK QKWTSEEEEA LRAGVRKHGT GKWKDIQKDP EFNPFLSSRS NIDLKDKWRN  120
MSVSGVGGPR EKARMRPRDS PVTLFSTPQP SAAAPVKRDP AAALLKRESS AAPVKREAAA  180
SLVKGEPVAD DSPTEAKTEA KTAPMYNAMI FEALSNSTDP NGLETGAIAN FIEQRYVLEK  240
KNEVPQNFRR LLSSRLRRLV AQEKLEKFQN CFKIKSDSSG ETKAPLPPKQ NDAPLAPNAP  300
KQNDTPAAPK QNDVQLTQLQ SHADVIPYET VEEAAVAAAY KIAEAENKSF VAAEAVKESE  360
RVSQMFEDTN SVLQLAEEFL KKCSQGEVLL VV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17520.1	1e-45	MYB_related family protein