PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002831.1_g000036.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 288aa    MW: 32596.3 Da    PI: 7.8956
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002831.1_g000036.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.91.9e-1971160290
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 
                                +Y+ YA+ +GF +r ++ ++    g+it+r++vC+kegkre +  + + + r+ ++etr++C a   ++ +k ++++ +t++++
  Rmu_sc0002831.1_g000036.1  71 WYRMYATALGFMTRLQRVTRG-IGGRITRRRLVCNKEGKREAKWLQkEARVRNAKQETRCNCLAACCIHFNKnSQTYIITEFKT 153
                                7***************99997.9999***************9976624667788999*****9999999888899********* PP

                       FAR1  84 eHnHela 90 
                                eHnH+la
  Rmu_sc0002831.1_g000036.1 154 EHNHDLA 160
                                ****996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MNFEHPSSSD CRYTEVQSAD QDSAGPPQEE RVSYGDENFT AKSRVGKSFA ELTAEDVEGR  60
EFATLDDAEN WYRMYATALG FMTRLQRVTR GIGGRITRRR LVCNKEGKRE AKWLQKEARV  120
RNAKQETRCN CLAACCIHFN KNSQTYIITE FKTEHNHDLA MYSNGSVTHA DMGHLGARRT  180
CSVSTSRADD YTELALKTKE AEAAVLKREL AECQRELELV KSADKYRYRT IEEVGGNSKK  240
QITEDNCNRG QSPEGGADIQ LLCSPGGWKS GFAPDKDMEF DSSKRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-11FAR1 family protein