PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002810.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | bZIP | ||||||||
Protein Properties | Length: 241aa MW: 26533 Da PI: 4.7769 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 54.9 | 1.9e-17 | 168 | 222 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kr rr+ +NRe+ArrsR+RK++ ++eLe v+ L eN++L +l ++++ Rmu_sc0002810.1_g000001.1 168 DIKRIRRMVSNRESARRSRRRKQQHLQELEGQVDILRVENSTLFMQLTDASQQYR 222 58*****************************************977766666655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MERNSAAVHS QMTPSMFGSS WDGDHMKRSA PQLEIDEWIN HGVTADNQDE FRADRSFAET 60 DGFFGDVCSG GDLSFAFKNR VIMNGFSSSG LTETLLSPQN LTPKNSSLSA TMDSQSSICV 120 GTPTSAANPI GRDNQARGAT SGSSGDQSDE DDFEIEAGPC GDSTNPLDIK RIRRMVSNRE 180 SARRSRRRKQ QHLQELEGQV DILRVENSTL FMQLTDASQQ YRDADTNNRV LKSDVEALRA 240 K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 183 | 190 | RRSRRRKQ |
2 | 185 | 190 | SRRRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 3e-25 | bZIP family protein |