PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002809.1_g000017.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 190aa    MW: 20985.8 Da    PI: 10.6457
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002809.1_g000017.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.42.9e-142282357
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +++t+t +q+++L+elF++   r  + e+ ++++ +l    +++ +++ +WF+N++a+ek+
  Rmu_sc0002809.1_g000017.1 22 SKWTPTIDQIRILNELFYNkgVRSSTVEQVQRITLQLkrygKIEGKNILYWFHNHKAREKQ 82
                               68****************7779*************************************97 PP
2Wus_type_Homeobox90.12.2e-292084265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++++WtPt +Qi+iL+el++ +G+r+ + e++qrit +L++yGkie+kN+ yWF N+kaRe+qk+
  Rmu_sc0002809.1_g000017.1 20 SSSKWTPTIDQIRILNELFYnKGVRSSTVEQVQRITLQLKRYGKIEGKNILYWFHNHKAREKQKK 84
                               5789*************98769*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDGGSNKATG SSANMLCRRS SSKWTPTIDQ IRILNELFYN KGVRSSTVEQ VQRITLQLKR  60
YGKIEGKNIL YWFHNHKARE KQKKRFTSDV HVPMQRSRLV GRSINLNFGS TSSTGVYGSI  120
NLNFRSTSSI GVDGSIKEIE TLPLFPMHGE DNIGNMKTTS EGGSGYGGGS RIPLSSASTP  180
PELLTWLSIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.19e-32WOX family protein