PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002786.1_g000030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 91aa MW: 10647.1 Da PI: 10.3425 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.6 | 8.9e-18 | 31 | 91 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+t+t++q+++L+el++ + p+ae+++++ +l +++ ++V++WFqN +a+e++ Rmu_sc0002786.1_g000030.1 31 TRWTPTTDQIRILKELYYDkgVKSPTAEQIQRICLQLkqygKIEGKNVFFWFQNLKARERQ 91 8****************96579*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 104.4 | 7.2e-34 | 29 | 91 | 2 | 63 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerq 63 + tRWtPt++Qi+iL+ely+ +G+++P++e+iqri +L++yGkie+kNVf+WFQN kaRerq Rmu_sc0002786.1_g000030.1 29 SDTRWTPTTDQIRILKELYYdKGVKSPTAEQIQRICLQLKQYGKIEGKNVFFWFQNLKARERQ 91 579***************9889****************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence |
MEPQIQQPTE DGGSNKAAGS SVNMLRRRSD TRWTPTTDQI RILKELYYDK GVKSPTAEQI 60 QRICLQLKQY GKIEGKNVFF WFQNLKARER Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 5e-31 | WOX family protein |