PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002751.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 115aa MW: 13361.2 Da PI: 9.8897 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 52.8 | 6.7e-17 | 8 | 67 | 3 | 56 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+ +t++q+++L+el+ + p+ e+ ++++ +l +++ ++V++W+qN+Ra+ek Rmu_sc0002751.1_g000003.1 8 TRWLPTTDQIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVFYWYQNQRAREK 67 7*****************6579*************************************9 PP | |||||||
2 | Wus_type_Homeobox | 96.5 | 2.2e-31 | 7 | 70 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyW+QN++aRe+ k+ Rmu_sc0002751.1_g000003.1 7 NTRWLPTTDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWYQNQRAREKLKK 70 79****************999****************************************885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence |
MHCKQCNTRW LPTTDQIRIL KELYDDKGVK SPTVEQVQRI TLQLKWYGQI ENKNVFYWYQ 60 NQRAREKLKK KNLTSDVQVP KQRSGLVGGS INLNFGSTSY ADVGGSIMEQ RGEDH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 3e-28 | WOX family protein |