PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002532.1_g000026.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HSF

Protein Properties

Length: 450aa MW: 50127.3 Da PI: 4.542

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002532.1_g000026.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.9	8.8e-35	41	133	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k++++++d++l+ +isw ++g+sfvv+d+ ef++ +Lp+ Fkhsnf+SFvRQLn+YgF+k+++++ weF+++ Rmu_sc0002532.1_g000026.1 41 FLSKTFDLVDDPSLDLIISWGSTGRSFVVWDPMEFSRLILPRNFKHSNFSSFVRQLNTYGFRKIDTDK---------WEFANEA 115 9**************************************************************999.........*** PP XXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkkse 103 F +gk++ll++i+r+ks+ Rmu_sc0002532.1_g000026.1 116 FLRGKRHLLKNIQRRKSS 133 *************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MPEPLLGGVA MDIEGMSGGS SDCVGVPQPL QCLQGTPVPP FLSKTFDLVD DPSLDLIISW 60 GSTGRSFVVW DPMEFSRLIL PRNFKHSNFS SFVRQLNTYG FRKIDTDKWE FANEAFLRGK 120 RHLLKNIQRR KSSQSLQIGS STGPSAEAGR PGLEGEIESL RNQRSLLMQE VVDLQQQQRG 180 TVQHMKAVNE RLQSAEQRQQ QMVSFLAKVL QNPAFLARLQ RKKEQKGIGS SSGQRKFVKA 240 RERELGRSDS YVEGQIVKYE PAWRNHTMSS AVPDVNPVPI ENSPDYGMPF QCENIAFDGL 300 MVSDELEVTP EQEGEGASSM VIEDPLSKGK SVVTQQQEVN PEPYISFQED LMKERSTFEE 360 LSFPGIESMV KPDDVWNMGF DASAGMSSST GFWSNPINCD MPEMGIPDGL FDIWDIGALQ 420 AAGGSGIDKW PADESAFDER ASQDEQPKDR

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MPEPLLGGVA MDIEGMSGGS SDCVGVPQPL QCLQGTPVPP FLSKTFDLVD DPSLDLIISW  60
GSTGRSFVVW DPMEFSRLIL PRNFKHSNFS SFVRQLNTYG FRKIDTDKWE FANEAFLRGK  120
RHLLKNIQRR KSSQSLQIGS STGPSAEAGR PGLEGEIESL RNQRSLLMQE VVDLQQQQRG  180
TVQHMKAVNE RLQSAEQRQQ QMVSFLAKVL QNPAFLARLQ RKKEQKGIGS SSGQRKFVKA  240
RERELGRSDS YVEGQIVKYE PAWRNHTMSS AVPDVNPVPI ENSPDYGMPF QCENIAFDGL  300
MVSDELEVTP EQEGEGASSM VIEDPLSKGK SVVTQQQEVN PEPYISFQED LMKERSTFEE  360
LSFPGIESMV KPDDVWNMGF DASAGMSSST GFWSNPINCD MPEMGIPDGL FDIWDIGALQ  420
AAGGSGIDKW PADESAFDER ASQDEQPKDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	1e-104	HSF family protein