PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002532.1_g000007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | C3H | ||||||||
Protein Properties | Length: 135aa MW: 15255.5 Da PI: 7.3852 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 30.5 | 6.4e-10 | 14 | 37 | 2 | 25 |
-S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaH 25 ++++C+f+++ G C++GdrC++ H Rmu_sc0002532.1_g000007.1 14 DRVNCPFYFKIGACRHGDRCSRLH 37 6899******************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MAEHLASIFG TEKDRVNCPF YFKIGACRHG DRCSRLHTKP SISPTLLLSN MYQRPDMLTN 60 PGVDPQGQAL DPRKIQDNFE VPQFSPLYLF DFNPNFFNLF FTLTDFKCFP LGPSVLNAQF 120 AGQFSLRSSV LGVEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44785.1 | 6e-33 | C3H family protein |