PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002515.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 859aa MW: 97487.8 Da PI: 6.1653 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 44.7 | 4.3e-14 | 67 | 141 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 Y++YA+ +GFs+ + + +++k +g i++ +f Cs+e +++++ ++ C+a+l+v++++ ++w+ tk+ ++H Rmu_sc0002515.1_g000008.1 67 LYEAYARCAGFSTHVGQFSRNKPDGPIVTWEFACSREVFKRKNVES--------------CNAMLRVERKDANTWVATKFIEDH 136 6***************************************999877..............************************ PP FAR1 86 nHela 90 nH++ Rmu_sc0002515.1_g000008.1 137 NHSME 141 **985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 859 aa Download sequence |
MDTQVLADVE AEDRERHGTV DSESDKGVKQ NVNDSFAGRE IIAQDEDGNA KPYVGMEFES 60 EDAAKALYEA YARCAGFSTH VGQFSRNKPD GPIVTWEFAC SREVFKRKNV ESCNAMLRVE 120 RKDANTWVAT KFIEDHNHSM ESPNKVHYLR PRRHFAGATK NTAETLDVTS DAYVSMDGNP 180 VPYEPNRGGR SVSPVEQNHP ARNFGPINCT RPSSRKRTLG RDAQNLLNYF KKMQAENPGF 240 YYAIQLDDEN RMTNVFWTDA RSRTAYNYFG DAVIFDTMYR PNQYQVPFAP FTGVNHHGQM 300 VLFGCALLLD ESESSFTWLF KTWLSAMNDR PPISITTDQD RAIQVAVAQV FPDARHCICK 360 WHILREGQER LAHIYLANPS FYGELYSCIN FSETIEDFES SWVSILDRYD LRRNDWLQAV 420 YNARKQWAPV YFRGTFFAAI SSNQGVRSFF DGYVNQQTSV PLFFKQYERA LEHALEKEIE 480 ADYDTICTTP VLKTPSPMEQ QAASLYTKKV FSKFQEELVE TFVYTANKID GDGLASKYRV 540 AKYEHDDKAY IVELNVSEMK ASCSCQMFEY AGILCRHILT VFTVTNVLTL PSHYILKRWT 600 RNAKSWVGVD EQISDPQGVE MLTVRFNNLC QEAIKYAEEG AVAVETYNAA MIALRDSGKK 660 IADLKKNVAK VVPPSSQGSG SIQEENMKKA SLPFGEMVPP LWPWQEALPH RFNLNDVGVP 720 VSDINQPSMA GSIQPDGGHP DNTVVYTCFK SMTWFIENKN STSAGKVAVI NLKLQDYRKN 780 PAGETDVQFR VTRVTLEPML RSMAYIGQQL SAPANRVAVI NLKLQDTNTT SGETEVKFQV 840 SRDTLDSMLR SMAYIREQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27110.2 | 0.0 | FAR1 family protein |