PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002508.1_g000034.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 74aa    MW: 8524.14 Da    PI: 4.037
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002508.1_g000034.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.9e-102568146
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                               ++ ++++E+ l+ + +++ G + W++Ia +++ gR+++++  +w++
  Rmu_sc0002508.1_g000034.1 25 KLDFSEDEEFLITRMFNLVGER-WSLIAGRIP-GRSAEEIEKYWNS 68
                               5789******************.*********.***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MADLDHSSDE SSVDSRAEDT SQDSKLDFSE DEEFLITRMF NLVGERWSLI AGRIPGRSAE  60
EIEKYWNSRY STSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.12e-17MYB_related family protein