PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002506.1_g000040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 282aa MW: 32079.7 Da PI: 6.4349 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.9 | 4.2e-12 | 2 | 42 | 8 | 48 |
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 Ed +l ++++ +G g W+ +++ g++R++k+c++rw++yl Rmu_sc0002506.1_g000040.1 2 EDRILREYITTHGEGKWRNLPKRAGLKRCGKSCRLRWLNYL 42 9**************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.7 | 2e-16 | 48 | 91 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ Rmu_sc0002506.1_g000040.1 48 RGNITRDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 91 7899******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MEDRILREYI TTHGEGKWRN LPKRAGLKRC GKSCRLRWLN YLRPDIKRGN ITRDEEELII 60 RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN TNIGKKVQDH SSTNSEANIT HRKPPNHQTQ 120 QKNTNVVRTK ASRCTKVFIP HLSQMDEENN PTVQQVAAPF LNHDYYDQVN NNDDPPLGMM 180 GTGTDHQPAD DLPPFLNLEI DDENSNSCGF MVDFKMDESF LSEFLNVDFS QLYSSTSTAN 240 GGDGVKAAIS TSCGDDNHHK LHGPDFQSSM APILDSELDW LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 5e-59 | MYB family protein |