PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002320.1_g000018.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 172aa MW: 19578.4 Da PI: 8.9043

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002320.1_g000018.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.2e-17	3	50	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ +Ed++l+d+++++G g+W++ ++ g++R++k+c++rw +yl Rmu_sc0002320.1_g000018.1 3 KGAWSIQEDQKLIDYIQKHGEGCWNSLPKAAGLRRCGKSCRLRWINYL 50 79********************************************97 PP
2	Myb_DNA-binding	53.3	6.4e-17	56	101	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Rmu_sc0002320.1_g000018.1 56 RGSFGEDEEDLIIRLHTLLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 101 899*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MTKGAWSIQE DQKLIDYIQK HGEGCWNSLP KAAGLRRCGK SCRLRWINYL RPDLKRGSFG 60 EDEEDLIIRL HTLLGNRWSL IAGRLPGRTD NEVKNYWNSH LKKKLLNIGT TTLRPNKPRE 120 INHAPYNKLV KYFNDMDDEV VDEVSADSGS TGISSCLVPK LNLDLSLSLA LE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	4e-64	MYB family protein