PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002148.1_g000026.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 282aa    MW: 31508.5 Da    PI: 8.7074
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002148.1_g000026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.24.4e-163292357
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +R+t+t++ql++L+el++    +yp+ e+++e+  +l    ++++++V++WFqN  a++++
  Rmu_sc0002148.1_g000026.1 32 NRWTPTPDQLRILQELYYDkvLKYPTPEQIQEICLHLkqygQIEDKNVFFWFQNLEARDRQ 92
                               7****************96679********************************9999986 PP
2Wus_type_Homeobox91.58.1e-303093264
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               +++RWtPtp+Q++iL+ely+ + l+ P+ e+iq+i  +L++yG+iedkNVf+WFQN  aR+rqk
  Rmu_sc0002148.1_g000026.1 30 TNNRWTPTPDQLRILQELYYdKVLKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLEARDRQK 93
                               689***************99688999*************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MAYPFRDLRE SDLLSAKAVC HSASRFARQT NNRWTPTPDQ LRILQELYYD KVLKYPTPEQ  60
IQEICLHLKQ YGQIEDKNVF FWFQNLEARD RQKLRLIQNV RVGGSLDLNF GSTSSTDDGR  120
SIDLNFGSTG STGDDGSIDL NFGSCVGYGA DPPPTIADDV GARLLLFISS SLTIFLTSMK  180
SENDRKGSKL PRTVELEISR SKGFGFRSKT GRAPTNVNPV TPGAILLAAP PCKVATDRCA  240
RTRRSQWKKF GEDWWPEEED IADRKSKAIS GRELAAAAGF QF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.14e-24WOX family protein