PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002141.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 169aa MW: 18619.3 Da PI: 4.7644 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 22 | 2.8e-07 | 2 | 33 | 30 | 57 |
HHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 30 reeLAkkl....gLterqVkvWFqNrRakekk 57 ++++ +l ++++++V++WFqN +a+e++ Rmu_sc0002141.1_g000001.1 2 IQKICLHLqqygQIEDKNVFFWFQNLKARERQ 33 6777777777779*****************97 PP | |||||||
2 | Wus_type_Homeobox | 55.8 | 1.1e-18 | 1 | 34 | 31 | 64 |
Wus_type_Homeobox 31 eiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +iq+i +L++yG+iedkNVf+WFQN kaRerqk Rmu_sc0002141.1_g000001.1 1 QIQKICLHLQQYGQIEDKNVFFWFQNLKARERQK 34 8********************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
QIQKICLHLQ QYGQIEDKNV FFWFQNLKAR ERQKIRLIQN VRVGGSLDLN FGSTSSTDDG 60 GSIDLNFGSW VGYRVDPYSS SPFNPNTSTT SFGTEGGHTF MEQRGGNHQE VETLPLFPMH 120 CEDVLGDPKT TSEGGGAYGY YSDGSGDYNG DSHVSLELSL NHSRAADLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05770.1 | 3e-13 | WOX family protein |