PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002119.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 29522.9 Da PI: 5.0501 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 94.4 | 1.8e-29 | 15 | 115 | 32 | 126 |
NAM 32 evikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfy 109 vi e+d++k+eP +Lp+ +++a + ew+fF++++ ky++++r+nr+tk+gyWk tg+++ ++++ +++++g k+tL+fy Rmu_sc0002119.1_g000002.1 15 IVILEIDLCKYEPAELPAallgtETEAPDMEWFFFTRKAYKYNKSSRSNRSTKKGYWKITGNERGITARrSKSVIGKKRTLTFY 98 4699*************5466655555667*************************************99566779********* PP NAM 110 kgrapkgektdWvmhey 126 +grapk++kt+Wv+h Rmu_sc0002119.1_g000002.1 99 QGRAPKSKKTSWVIHGH 115 **************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MQSGWFQKYT WINNIVILEI DLCKYEPAEL PAALLGTETE APDMEWFFFT RKAYKYNKSS 60 RSNRSTKKGY WKITGNERGI TARRSKSVIG KKRTLTFYQG RAPKSKKTSW VIHGHYLPGD 120 GVASYPKQAQ GDFVICLLKI RSDKKDSPVS NEGEPRSTSV SEMNQEGNEK LLFHQPQPLD 180 DCCSSALQSP VSQELEAVLQ TNVTNDDCNE LQSPFGDSDS YLLDGNEVST CDEDETVYDV 240 FPQLCDPPEQ NLDSRFGPHQ P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 5e-22 | NAC family protein |