PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002080.1_g000046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 216aa MW: 24375.7 Da PI: 10.8523 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 53.8 | 3.3e-17 | 30 | 90 | 2 | 56 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+ +t++q+++L++l+ + p+ e+ ++++ +l +++ ++V++WFqN+Ra+ek Rmu_sc0002080.1_g000046.1 30 NTRWLPTTDQIRILKKLYDVkgVKSPTVEQVQRITLQLkwygQIENKNVFYWFQNQRAREK 90 58****************95469*************************************9 PP | |||||||
2 | Wus_type_Homeobox | 96 | 3.2e-31 | 29 | 92 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW Pt++Qi+iL++ly+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k Rmu_sc0002080.1_g000046.1 29 SNTRWLPTTDQIRILKKLYDvKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWFQNQRAREKLK 92 789*****************9****************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MEPQNRHPTE DGGSNKAAES SPNMHCKQSN TRWLPTTDQI RILKKLYDVK GVKSPTVEQV 60 QRITLQLKWY GQIENKNVFY WFQNQRAREK LKNNKLTSDV QVPAKMNQRA REKLKKKKLT 120 SDVQVPKQRL GLFGGSINLN FRSTSSAGVG GSIMEQRGED HQEIKTLPLF PMHGEDIFGN 180 MRTTSDGGGG HGGGSHISLE LSLSWVGKAR KSFRSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 3e-25 | WOX family protein |