PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001974.1_g000022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 220aa MW: 25166.9 Da PI: 4.4584 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59.9 | 7.9e-19 | 125 | 210 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 Y +Y+ + GF+vrk+ +k++ ++g ++ ++Cskeg+r++++k+ +++ + ++tr+gCka++ ++++gk++ +++++H Rmu_sc0001974.1_g000022.1 125 AYAKYGGKSGFNVRKQLKKRN-NKGLAVRLLYCCSKEGYRKTRTKR--ETSYSLPVTRVGCKAQMSCYRQSNGKFKTVSFDTNH 205 59*************998887.788899***************999..99999******************************* PP FAR1 86 nHela 90 nHel Rmu_sc0001974.1_g000022.1 206 NHELI 210 ***96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MDTISDEDEE QIALGQAVTK NIICINNELL SGREVAFLDE DEFGLQGYDE FNLLGENGID 60 LQGEEQDDLV SEEEDDLVSE DEVDVQTEEI FQCNDSSLSS NEDKEKKEEL YIRMEFSSDE 120 SAYKAYAKYG GKSGFNVRKQ LKKRNNKGLA VRLLYCCSKE GYRKTRTKRE TSYSLPVTRV 180 GCKAQMSCYR QSNGKFKTVS FDTNHNHELI KTPMKHMVQV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 163 | 170 | RKTRTKRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 2e-13 | FAR1 family protein |