PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001925.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 353aa    MW: 37295.9 Da    PI: 9.6229
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001925.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.8e-20159208255
                        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+tae Aa+a++ a+++++g
  Rmu_sc0001925.1_g000007.1 159 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEAAAQAYDTAALRFRG 208
                                8********.**********66.....56*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
LLFSQQQRRG GGGSSGGGAG AGAGGILASS SMLLRLDRER EMSAMVSALT HVVTGEEQTR  60
FDVVNGSDSP AGNGLCGGVG SKREREEEGG GGGQNMSESV SRLSRTFDDF PQQGSPSSSS  120
VFPENSITRT RRTTSTTPPV QTAYEYSAPQ LSEQPIRRKY RGVRQRPWGK WAAEIRDPFK  180
AARVWLGTFD TAEAAAQAYD TAALRFRGNK AKLNFPENVR LRSLPSSAAE NPMTTQPTVS  240
ASSNALLSIP TSTEPIVHYQ AAASFQQQRP MSLYDQMVLL SSSSSPSATS SSTLASSVSS  300
ASSSPPPPAF SSLFSAQATS PVQLRQATGD QSGGADFSVQ QQWSTSSGHY STS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.15e-29ERF family protein