PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001609.1_g000030.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 301aa    MW: 34085 Da    PI: 4.6904
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001609.1_g000030.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-1996146256
                        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                +++GVr+++ +g+W+AeIrd +     r  r++lg+f taeeAa  +++a+ +l+g+
  Rmu_sc0001609.1_g000030.1  96 KFRGVRQRP-WGKWAAEIRDpV-----RkSRVWLGTFETAEEAALVYDRAAIQLRGH 146
                                89*******.**********44.....55**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDSNYPTKYT EKRTLTKKLV KHFPNVAVPK IVRISVTDED ATDTSSDEEE QDQQQQRLTK  60
RVINEVRIEE ESEAVRVLLA KNQKPKPKPL PEEKRKFRGV RQRPWGKWAA EIRDPVRKSR  120
VWLGTFETAE EAALVYDRAA IQLRGHNALT NIIAPPSKVL ISDHDSSSNE SSSMNNLSCS  180
NASSSIDHIV VIDEYDCGKE CQSIRSPTSV LCGSDNEWRP GSTEQDETHF VKDYGYFDGV  240
ISSTEAIFFG ATEPILLEDM NLVPETMLRD DLSDISLDSV GDFRSCKWNV EDFFQDQCGG  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46310.12e-32ERF family protein