PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001593.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 211aa    MW: 23061.9 Da    PI: 6.7651
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001593.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.6e-2095146156
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                s+y+GVr+++  g+W+AeIrdp+    r  r++lg+f taeeAa+a++ a+ +++ge
  Rmu_sc0001593.1_g000004.1  95 SKYRGVRQRP-GGKWAAEIRDPR----RaVRVWLGTFQTAEEAARAYDTAAIEFRGE 146
                                89********.9*********82....48*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MPSHSGGLPK EQEHAIIVSA LKQVVRGRTT QPPPPQLHYA SSSLPPTGGT DQVVIPFSDC  60
DACQVCNMKM DDCLGCGLFR PSEQDEGKGK KMKTSKYRGV RQRPGGKWAA EIRDPRRAVR  120
VWLGTFQTAE EAARAYDTAA IEFRGERAKL NFPLSSEAGT TTTGAALTRQ SMETGEVNQV  180
TASSVKSANQ EEGQSSDVKD EDIDRFVWEM L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.14e-27ERF family protein