PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001551.1_g000035.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HSF
Protein Properties Length: 130aa    MW: 15439 Da    PI: 9.5429
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001551.1_g000035.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind46.11.3e-143584251
                               HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HH CS
               HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfa 51
                               F  k++++++d++l+ +isw ++g+sfvv+d+ efa+ vLp+ Fkh+n++
  Rmu_sc0001551.1_g000035.1 35 FCAKTFDLVDDPSLDLIISWGSTGRSFVVWDPVEFARLVLPRNFKHNNLQ 84
                               999*********************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MVRRARLNLS VVGVAIMWEC RSRFSVCMRL RCRRFCAKTF DLVDDPSLDL IISWGSTGRS  60
FVVWDPVEFA RLVLPRNFKH NNLQREKEEK FDEQQMLQCS FDGNEGMKIK AEPYLFQCNF  120
PERRRTKLVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.13e-24HSF family protein