PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001421.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 402aa    MW: 44465.9 Da    PI: 9.4653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001421.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.2e-19212261356
                        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                ++GVr+++ +g+WvAeIr p++   r+r++lg+f+ aeeAa a++ a+  l+ge
  Rmu_sc0001421.1_g000007.1 212 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDKAEEAASAYDTAAYMLRGE 261
                                8******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MDDKFPKMET FIPKQFPYFP GMASSTGSNF LGDPAGWEVG GLKSSLSPES STSSSAGEVS  60
DNSTLINKTN PVVPVNFLET FPVLNKAHVS DQPPTSPASL SSKPSNFPNL TLLLQEPTTL  120
LDPSSPKKCD ESMFSSLSPS FPIPHLEHCQ PDFDQWLKIS QTLAKNPSKG FNDYWLSATK  180
TQPMKSSGRS RFQNQQQKQP SAPIPSSQGK LFRGVRQRHW GKWVAEIRLP RNRTRVWLGT  240
FDKAEEAASA YDTAAYMLRG EYAHLNFPDS KHQLKANALN GNTSTTAALL EAKLQLAISQ  300
QANKKTNIME SSSSSSPPSP KKKKHSSADD RHQKNSNSII NSNLISQNQI TRKEWQLGSD  360
QVIFESKKSQ DVISSSDMDA VQLSRMPSLD MDMIWDALLV SD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.11e-53ERF family protein