PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001298.1_g000013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 232aa MW: 26453.6 Da PI: 9.3337 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.4 | 1.9e-19 | 32 | 79 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++ + +G + Wk+Ia++ g++R++k+c++rw++yl Rmu_sc0001298.1_g000013.1 32 KGAWTAEEDQKLAEVTAIHGAKKWKSIAAKAGLNRCGKSCRLRWLNYL 79 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5e-16 | 85 | 130 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l Rmu_sc0001298.1_g000013.1 85 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 130 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MAPKKEESAK REVMKMKSLE AVMKNTKREV NKGAWTAEED QKLAEVTAIH GAKKWKSIAA 60 KAGLNRCGKS CRLRWLNYLR PNIKRGNISD QEEDLILRLH KLLGNRWSLI AGRLPGRTDN 120 EIKNYWNSHL SKRINQKEKQ RNTGGDDDST RQISTVDQKP GTHLGEQNKI HGEMKQDSSS 180 EEGTTTTTTT SASNKGGDDH ENYSNLDIDI DDFFDFSNEG PFNLEWVNKF LY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27920.1 | 3e-54 | MYB family protein |