PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001184.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 392aa MW: 43259.6 Da PI: 6.849

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001184.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.5	1.4e-28	193	251	1	58
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv++sae+p +++ tYegeHnh Rmu_sc0001184.1_g000004.1 193 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApTCPVKKKVQKSAENPCLLVATYEGEHNH 251 58*************************99************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDSSTWVNTS LGLNLVPNDS LQAMDEGQPP VPTITKKVGE FEGEYDIFES NLRSVKQEAG 60 AGAGGSVLMA QELNRISLEN KKLTEMLTVL CENYNSLEAH VKELMTTKQL ASENESMILG 120 NNCLIKKRKS PVDDHQDYCN NVNMIGFTTN TTTGETSSSD EEAYKRPKEM SNINLKISRV 180 YVRTDVSDTR LIVKDGYQWR KYGQKVTRDN PSPRAYYKCS FAPTCPVKKK VQKSAENPCL 240 LVATYEGEHN HILPAEPQVI TIDHHGQGRN LITTALPLRH DHSSISLAPK RSSSPSSSPT 300 TVSVSMSMSS SSVLDSSTEP GSSFGYKPNQ GRQASDDIYD EKATNFQQLL VQQMASSLTK 360 DPNFTTALAA AISAGRFNIL DQPHPHPPIP KW

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDSSTWVNTS LGLNLVPNDS LQAMDEGQPP VPTITKKVGE FEGEYDIFES NLRSVKQEAG  60
AGAGGSVLMA QELNRISLEN KKLTEMLTVL CENYNSLEAH VKELMTTKQL ASENESMILG  120
NNCLIKKRKS PVDDHQDYCN NVNMIGFTTN TTTGETSSSD EEAYKRPKEM SNINLKISRV  180
YVRTDVSDTR LIVKDGYQWR KYGQKVTRDN PSPRAYYKCS FAPTCPVKKK VQKSAENPCL  240
LVATYEGEHN HILPAEPQVI TIDHHGQGRN LITTALPLRH DHSSISLAPK RSSSPSSSPT  300
TVSVSMSMSS SSVLDSSTEP GSSFGYKPNQ GRQASDDIYD EKATNFQQLL VQQMASSLTK  360
DPNFTTALAA AISAGRFNIL DQPHPHPPIP KW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	4e-54	WRKY family protein