PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001167.1_g000007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 156aa MW: 17916.2 Da PI: 7.451 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.4 | 3.6e-21 | 50 | 135 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 Y+eY+ ++GFsvr+ + +k+ n+ +++ +++Cskeg++ +++ + e ++ r rtgC+ k++ +++++ w+ t ++ eH Rmu_sc0001167.1_g000007.1 50 LYCEYGARMGFSVRIMQRRKT--NNVVKQVNYCCSKEGFKLDSDPS-EVKKADRLDIRTGCTTKIRFGLQDNNLWKATLFVPEH 130 7***************98888..889****************9999.99999******************************** PP FAR1 86 nHela 90 nH+la Rmu_sc0001167.1_g000007.1 131 NHKLA 135 ***97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MPTLIDIEDD GEHSMGTALG KDSMFVNRQT SNDDDLYGVI VNSEEEAYNL YCEYGARMGF 60 SVRIMQRRKT NNVVKQVNYC CSKEGFKLDS DPSEVKKADR LDIRTGCTTK IRFGLQDNNL 120 WKATLFVPEH NHKLAKLEER QFFSNRKVSN AHQGVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.2 | 3e-14 | FAR1 family protein |