PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_sc0000996.1_g000006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 133aa MW: 14623.3 Da PI: 4.6831 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 43.2 | 1.3e-13 | 70 | 127 | 2 | 58 |
FAR1 2 fYne.YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraet 58 fYne YAk vGFsvr+ ++k+sk +geit+++f Cskegk++e+ +++++++++++e+ Rmu_sc0000996.1_g000006.1 70 FYNEiYAKIVGFSVRMGSTKRSKVTGEITWKQFLCSKEGKTDETYENSKRQHSSTMES 127 88866**************************************999955555555544 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 133 aa Download sequence |
MASCHVGGGD EGKTGQKCDG LLAGAEPSFG LTGFMMGDPS LQDLNENGIV DEPKLQLGQE 60 FESIEEAYYF YNEIYAKIVG FSVRMGSTKR SKVTGEITWK QFLCSKEGKT DETYENSKRQ 120 HSSTMESKKG IAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G06250.1 | 4e-11 | FAR1 family protein |