PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000663.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 299aa    MW: 33105.6 Da    PI: 6.0957
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000663.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox52.58.2e-173999357
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +R+t+t+ ql +L+el++    +yp+ e+++e+  +l    ++++++V++WFqN +a+e++
  Rmu_sc0000663.1_g000011.1 39 NRWTPTPAQLGILQELYYDkdLNYPTPEQIQEICLHLkpygQIEDKNVFFWFQNLKARERQ 99
                               7****************96569*************************************97 PP
2Wus_type_Homeobox90.31.9e-2937100264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp Q+ iL+ely+ + l  P+ e+iq+i  +L+ yG+iedkNVf+WFQN kaRerqk
  Rmu_sc0000663.1_g000011.1  37 TTNRWTPTPAQLGILQELYYdKDLNYPTPEQIQEICLHLKPYGQIEDKNVFFWFQNLKARERQK 100
                                579***************987999***************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MEPRTLQLME LQTQQQVEDG GNNQVAESSA NTPIRPTTNR WTPTPAQLGI LQELYYDKDL  60
NYPTPEQIQE ICLHLKPYGQ IEDKNVFFWF QNLKARERQK LREFRNVRVG GSLDLNFGST  120
SSTDDGRSID LNFGSTGSTG TDGSIDLNFG SCVGYGVDPY SSSPFNTNTH TTSFGTTGGQ  180
SFMEQRGGDH QEVECNTRLA KLPTTFLGNG TAGSGGEETG FVHPRFSSKH GNSSYRNLLK  240
LHSQVRFNHL KLPEAPCTEE LSLEAAGAQH RSDRNGAKDP NISSYRPPFF MILGLMNSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-22WOX family protein