PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000588.1_g000007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 84aa MW: 9743.91 Da PI: 4.7403 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 40.1 | 1.1e-12 | 4 | 83 | 1 | 71 |
NAM 1 lppGfrFhPtdeelvveyLkkk..vegkk...leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatg 71 +p+Gf FhPt++el+ +yL k v++++ +++v++e+d+y +++Pw++ ++ ++++++fF k +k +++g Rmu_sc0000588.1_g000007.1 4 VPVGFWFHPTEDELIRFYLYMKnkVSAREddsEAATTVVPEFDLYgETQPWNIWVahgGADLHDQDLFFFKKLNKVNPHG 83 599**************997661155555553333357*****99568*****73233444478899***9999988766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence |
MANVPVGFWF HPTEDELIRF YLYMKNKVSA REDDSEAATT VVPEFDLYGE TQPWNIWVAH 60 GGADLHDQDL FFFKKLNKVN PHGT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 9e-11 | NAC family protein |