PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000365.1_g000038.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 213aa MW: 23189.6 Da PI: 7.0575 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.2 | 1.2e-17 | 30 | 90 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t++q+++L++++ + ++p+ e++++++ +l ++ ++V++WFqN++ +e++ Rmu_sc0000365.1_g000038.1 30 STRWAPTADQIRILKDFYDNgGKNPTPEQIQRITLQLkrygLVENKNVFYWFQNHKSRERQ 90 58*****************99****************99988899**************97 PP | |||||||
2 | Wus_type_Homeobox | 104.5 | 7.1e-34 | 29 | 92 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW+Pt++Qi+iL++ y++G ++P+ e+iqrit +L++yG +e+kNVfyWFQN+k+Rerqk+ Rmu_sc0000365.1_g000038.1 29 SSTRWAPTADQIRILKDFYDNGGKNPTPEQIQRITLQLKRYGLVENKNVFYWFQNHKSRERQKK 92 689***********************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MEPQTQQPTE DGGSNKAVGS SANMHCRRSS TRWAPTADQI RILKDFYDNG GKNPTPEQIQ 60 RITLQLKRYG LVENKNVFYW FQNHKSRERQ KKKLTSDVHV PMQRSGLVGG SINLNFGSTS 120 STGVDGSINL NFGSTCSAGV GGSIMEQRGE DHQEIETLPL FPMHGEDIFG NMKTTFEGGS 180 GYGYYSGGWD GNNGGSRISL ELSLNSSGSA DVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-27 | WOX family protein |