PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000359.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GATA
Protein Properties Length: 179aa    MW: 19800.2 Da    PI: 9.0854
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000359.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.8e-18129163234
                       GATA   2 s..nCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                                +  nC++++Tp+WRrgp g+ktLCnaCG++yrk +
  Rmu_sc0000359.1_g000002.1 129 TnfNCRVSETPMWRRGPLGPKTLCNACGIKYRKLK 163
                                5559****************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MDQVDLTLKL SLPSIQDDDH PDEVPQDVPQ HLNAHGSYDI NQGLGFGSAV SAGNAHASQY  60
SAMSITDFQR SVSVTERRQQ RLTPPTEMRE FCVLNVSHNK GKVGGSRKKN TTRCQRPAPK  120
IDNQNRTCTN FNCRVSETPM WRRGPLGPKT LCNACGIKYR KLKLKEKEGE GTTGEGSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.13e-15GATA family protein