PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000285.1_g000021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 193aa MW: 21579.3 Da PI: 10.3826 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 49.4 | 7.6e-16 | 30 | 90 | 2 | 56 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+ +t++ +++L+el+ + p+ e+ ++++ ++ +++ ++V++WFqN+Ra+ek Rmu_sc0000285.1_g000021.1 30 NTRWLPTTDKIRILQELYDDkgVKSPTVEQVQRITLQIkwygQIENKNVFYWFQNQRAREK 90 58*****************6579*************************************9 PP | |||||||
2 | Wus_type_Homeobox | 91 | 1.1e-29 | 29 | 93 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW Pt+++i+iL+ely+ +G+++P+ e++qrit +++ yG+ie+kNVfyWFQN++aRe+ k+ Rmu_sc0000285.1_g000021.1 29 SNTRWLPTTDKIRILQELYDdKGVKSPTVEQVQRITLQIKWYGQIENKNVFYWFQNQRAREKLKK 93 789****************999****************************************885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MEPQNRHPTE DGGSNKAAES SPNVHFKQSN TRWLPTTDKI RILQELYDDK GVKSPTVEQV 60 QRITLQIKWY GQIENKNVFY WFQNQRAREK LKKKKLTSDV QVPKQRSRLV GGSINLNFRS 120 TCSAGVGGSI MEQRGEDHQE IKTLPLFPMH GEDILGNMKT TSDGGGGHGG GSHISLELSL 180 SCKGKAGKSF RSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 4e-25 | WOX family protein |