PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8467529.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 266aa MW: 30200.5 Da PI: 5.2604 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61 | 2.6e-19 | 101 | 150 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +grW+AeIrdp + kr +lg+f taeeAa +++a+ kl+g Rmu_co8467529.1_g000001.1 101 HFRGVRQRP-WGRWAAEIRDPI----QrKRLWLGTFNTAEEAAIIYDRAAVKLRG 150 79*******.**********83....35*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MAKFSEHFIS VNKFVHENSQ TTHLESRRVL QKRVRIILTD PDATDSDSDD DESSAVRRVK 60 RHVKEINLER ASSSFKLPKR EQPETRPDPK SPKSDPARKK HFRGVRQRPW GRWAAEIRDP 120 IQRKRLWLGT FNTAEEAAII YDRAAVKLRG PDAVTNFPNA VATEETVVAE EVVVPTAHEE 180 ERSFGSTATC DSSSNEEPAS SPTSVLRYDD PAPFEGFHYC DFHACGFEYD VPLLNLPDIM 240 VPASNNFNHD EFGEFDVNDF LVDVIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 4e-35 | ERF family protein |