PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8429119.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 228aa    MW: 25767.3 Da    PI: 4.7843
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8429119.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.42.3e-09123106128
                        NAM 106 LvfykgrapkgektdWvmheyrl 128
                                Lvfykgrap+g+k+dW+mheyrl
  Rmu_co8429119.1_g000001.1   1 LVFYKGRAPRGQKSDWIMHEYRL 23 
                                8********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
LVFYKGRAPR GQKSDWIMHE YRLDDNTSRI TDVSVVVGEA SQEEGWVVCR IFKKKNLHKT  60
IDSPILIAPT SSITTDNITS IFVSSCDYND EETLKHILDC MGSRTCKEET NEANNSLIMN  120
HIHGFHDDDD RFLNLPSLES PNSSAENDDP VGHQSVDSVG LTNWAALDRF VAAQLDGRET  180
MTYPESGKCF STDHHDYHDH ELQLPTTLRS SNSSSNEIEL WPTFAPHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.12e-41NAC family protein