PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8403039.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GATA
Protein Properties Length: 248aa    MW: 27311.3 Da    PI: 9.5919
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8403039.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.66.1e-17142176135
                       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                                C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  Rmu_co8403039.1_g000001.1 142 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 176
                                99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
SGNRSFGDSQ FSGDLCVPYD DLAELEWLSN FVEDSFSVDK DLQALQILST TTAKPQTPET  60
SSSSAETPQN PPLFHHETPL PGKARSKRSR AAPGDWTTRL LHLITPNNSS EPKPAAKTTT  120
SSQKKREGGS CNSGSDSSGR KCLHCASEKT PQWRTGPMGP KTLCNACGVR YKSGRLVPEY  180
RPAASPTFVS ARHSNSHRKV LELRRQKEFQ RSHQHQFLSP SSIFGVSNGG GDEFLIHHRG  240
ANDFRQMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-71GATA family protein