PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8391943.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 102aa MW: 12049.9 Da PI: 10.961 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 74.4 | 2.7e-23 | 7 | 84 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 a++kew+fF++ ky++++r+nr++k+gyWk tgk++ ++++ +++++g k+tL+fy+ r pk++kt+Wv+ ey l Rmu_co8391943.1_g000001.1 7 GAQDKEWFFFTRMYYKYNKSSRSNRSAKKGYWKITGKERGIKARrSKAVIGSKRTLTFYQDRVPKSNKTSWVILEYYL 84 46889*************************************98566779**************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MLGTDTGAQD KEWFFFTRMY YKYNKSSRSN RSAKKGYWKI TGKERGIKAR RSKAVIGSKR 60 TLTFYQDRVP KSNKTSWVIL EYYLPGNGVI SYLKRLDISR LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15170.1 | 5e-17 | NAC family protein |