PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8349065.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 213aa MW: 23951.2 Da PI: 7.552 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 93.6 | 2.4e-29 | 105 | 192 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 fYn Y+ ++GF++r+++ ++sk++g+i+ rtfvCskeg+r++++++ +k+ ++ra tr+gC a+l +kk + gkw+vtk+ +eH Rmu_co8349065.1_g000001.1 105 FYNVYGLRMGFNTRMNYLSRSKHDGTIIARTFVCSKEGYRKPDRRD-KKTVNPRAPTRVGCMAMLSIKKLNIGKWVVTKFIKEH 187 9******************************************999.9************************************ PP FAR1 86 nHela 90 nH+l Rmu_co8349065.1_g000001.1 188 NHALI 192 **995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
SIGTDQGKPV IFIAEFTYDS LNLHIFAVDS VLDINVNEEV STGSTDTEFK HSNDGALVGT 60 SLQKILWVVQ NDERTQNSSK DGSVVEVDEP YVGQEFDTEV NAQAFYNVYG LRMGFNTRMN 120 YLSRSKHDGT IIARTFVCSK EGYRKPDRRD KKTVNPRAPT RVGCMAMLSI KKLNIGKWVV 180 TKFIKEHNHA LIASKRPKGL IEDQIPVSYC DIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 2e-47 | FAR1 family protein |