PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8302323.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 263aa    MW: 30125.2 Da    PI: 5.225
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8302323.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.83.6e-2257955128
                        NAM  55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                + +wyfF++r+ ky++++r+nr+t++g+Wk tgkd+++++  +++++  ++tL+fyk   +k++kt Wv+hey l
  Rmu_co8302323.1_g000001.1   5 QGKWYFFTPREYKYPNSRRSNRTTREGFWKITGKDRDIKALrSKAVIERRRTLTFYKRGVSKSQKTGWVIHEYYL 79 
                                458***********************************987466678999******9999999**********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
SWDSQGKWYF FTPREYKYPN SRRSNRTTRE GFWKITGKDR DIKALRSKAV IERRRTLTFY  60
KRGVSKSQKT GWVIHEYYLI QAHSDPPKQI GDFVVCCLKY KSDNSDHDKD APFCDRGSSS  120
CSMASNVENQ AEENWASIKQ VNVVPIPNGN DDEAETGGGT ITEEEEYLAL KELEDALQIP  180
IGNPHDFQGM QTDPCHIDEN DLSTSVEGRP DKSNSSDMTE ELLDDPQNLD LLFHPPAPPQ  240
LHQLHQSPMY TTNVHNDECR KRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66300.11e-22NAC family protein